CDS
| Accession Number | TCMCG057C57127 |
| gbkey | CDS |
| Protein Id | XP_018463288.1 |
| Location | complement(join(799..914,1005..1068,1160..1238,1347..1577,1674..1760,1855..2114,2202..2305,2443..2518,2634..2822,2916..3014,3099..3182,3450..3572,3656..3748,3856..3933,4018..4140,4227..4355,4443..4493,4585..4713,4820..4897,4977..5053,5126..5216)) |
| Gene | LOC108834450 |
| GeneID | 108834450 |
| Organism | Raphanus sativus |
Protein
| Length | 786aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA344915 |
| db_source | XM_018607786.1 |
| Definition | PREDICTED: pre-rRNA-processing protein TSR1 homolog [Raphanus sativus] |
EGGNOG-MAPPER Annotation
| COG_category | S |
| Description | pre-rRNA-processing protein TSR1 homolog |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko03009 [VIEW IN KEGG] |
| KEGG_ko |
ko:K14799
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway | - |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005634 [VIEW IN EMBL-EBI] GO:0005730 [VIEW IN EMBL-EBI] GO:0031974 [VIEW IN EMBL-EBI] GO:0031981 [VIEW IN EMBL-EBI] GO:0043226 [VIEW IN EMBL-EBI] GO:0043227 [VIEW IN EMBL-EBI] GO:0043228 [VIEW IN EMBL-EBI] GO:0043229 [VIEW IN EMBL-EBI] GO:0043231 [VIEW IN EMBL-EBI] GO:0043232 [VIEW IN EMBL-EBI] GO:0043233 [VIEW IN EMBL-EBI] GO:0044422 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044428 [VIEW IN EMBL-EBI] GO:0044446 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0070013 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGGGCGCTCTCGAGTTCAAGTCAATAAGGCTCACAAAACTCGTTTCTCCTCTAAATCTTCCCGCAATCTTCACAAAACCTCTCTCCAAGATGGAGGCAGGATTGGTAAACCGGAGGGTAACCATGTTAAAGGAGCTAGAGCTGCTCGTCTCCAGCGTGGCAAAATGCTTAGAGAGCAGAAAAGAGCAGCGGTTTTGAAGGAGAAGAGGGCTTCAGGAGGCTTATCCAGCGCTCCTCGTGTTATCGTCTTGTTTCCTCTCTCTGCTTCTGTGGATTTGGATTCAGTTGGTGAAGATGTTTTAAAGCTGTTATCGACTGATGGTGGTGATCATTCTTCAACAGTTGCATCGTCTGAGTATAAGCTAAGAGCAACAGTGTTGAAGGCGCCTCATGGGGATCTTCTGACATGCATGGAAATGGCCAAGGTTGCTGATCTAATCGCTTTTGTTGCATCTGCAAACGAGGATATCTCTAGCTTAATAGATTCATTCGGAAGTCAGTGTCTTTCTGTGCTTAGATCAATTGGTCTACCAAGTACCGCTGTGTTGATACGTGACTTACCAAGCGAGTTAAAAAAGAAAAATGAGCTGAAAAAGATATGTATCTCTCAGCTTACTTCTGAATTTCCTGAAGATTGTAAGTTCTATCCAGCCGATACCAGAGATGAGTTGCATAAGTTCATGTGGTTATTCAAGGCACAAAGGCTTTCTGTACCTCATTGGCGAAGTCAAAGACCATATGTTGTGGCTCACAAGGTTGGGATGCTGGTGGATGATAAAAGCCCAGGAGAGTGCACTCTTCTTCTCTCCGGTTATCTGCGTGCTCGTAAGCTATCTGTAAATCAGCTGGTCCATGTTACTGGCGTCGGTGATTTTCAGCTCTCGAAAGTCGAAGTCCTGAAGGACCCATTTCAATTAAATGAAAGGAAAAAACAGAATTCCATGGAATTGGATGAATCACATGATGAAGAGGTACTGAGGTCTCTGGTTCCTGATCCCATGAGTCAAGAGCCTTTAGTAGTTGAAAACACTCCAGATCCTTTGGCAGGGGAACAGACATGGCCAACTGAGGCAGAAATGGCTGAGGCTGACAGAAATCAGGAACAGAGAAAGTCAAAGAAGAGGATTTTGCCACGAGGGACTTCAGAATATCAGGCTGCTTGGATTGTGGATGAGGAGATAGATGAAGAGGATTCTGATAATGGTGATTCCGATGATGATGGTATGGTGTTGGATAGAGGAGAGGATCACTATTCCAATCAAGACCAAGATTTTGAGGATGATAAAGAAACACTGTACGTGCAGGATATGGATAATGAAACTCATAATGACTCCGAGATGATGGATGATGAAAACTTGACAAGAGAACAATACGAGGATCAAATCAAGAAAATCAAAGAGGCACATGCTGAAGATGAAGAATTTCCAGATGAGGTTGAGACTCCCATTGATCAGCCTGCAAGAAAACGTTTTGCAAAGTACAGGGGTCTCAAATCCTTCAGAACCTCCTCTTGGGATCCAAATGAGTCTCTACCTCAGGATTATGCCAGAATCTTTGCTTTTGATAACGTCGTTAGGACTCAAAAGCTTGTGCTCAAGCAAGCCCAGAAGATGGAAGAAGAAAGCAGAGAAGATTGTGTACCAACTGGGTCTTATGTACGGCTGCATATTAAGGAAGTGCCTATTGTTGCTGCCTCTAAACTATCCTCCATCGTAAGCACGAAACCCGTTATAGCATTTGGGCTTTTACAGCATGAATCCAAGATGTCGGTTCTGAACTTTAGCTTAAAGAAGTATGATGGTTACGAAGATCCTATTAAAACGAAAGAAGAGCTGATGTTCCATGTTGGTTTCCGTCAGTTCGTTGCAAGGCCAGTATTTTCAACAGACAATTTCAGGTCAGACAAACACAAGATGGAGAGGTTTCTGCATCCAGGTCGCTTCTCGTTGGCTTCAGTATACGGTCCAATATCTTTCCCATCCCTTCCTGCGGTAGTTCTGAAGATTTCTGAAGGGTCCGATGCTCCTGCCGTTGCTGCCCTTGGTTCCTTGAAAAGCATTGAACCCAACAAAATAATCTTGAAGAAGATAATATTGACTGGGTATCCTCAGAGAGTATCAAAAATGAAAGCATCAGTAAGATATATGTTCCATAACCCGGAAGACGTGAGATGGTTTAAGCCTGTAGAAGTGTGGACAAAATGTGGGCGTCGTGGTCGCGTGAAGGAGCCAGTGGGCACACATGGGGCAATGAAATGCATATTCAATGGAGTGGTGCAGCAACATGACGTTGTGTGCATGAACTTATACAAGCGCGCTTATCCCAAATGGCCTGAGCGTATGTACCCGCAGCTTCTGTAA |
| Protein: MGRSRVQVNKAHKTRFSSKSSRNLHKTSLQDGGRIGKPEGNHVKGARAARLQRGKMLREQKRAAVLKEKRASGGLSSAPRVIVLFPLSASVDLDSVGEDVLKLLSTDGGDHSSTVASSEYKLRATVLKAPHGDLLTCMEMAKVADLIAFVASANEDISSLIDSFGSQCLSVLRSIGLPSTAVLIRDLPSELKKKNELKKICISQLTSEFPEDCKFYPADTRDELHKFMWLFKAQRLSVPHWRSQRPYVVAHKVGMLVDDKSPGECTLLLSGYLRARKLSVNQLVHVTGVGDFQLSKVEVLKDPFQLNERKKQNSMELDESHDEEVLRSLVPDPMSQEPLVVENTPDPLAGEQTWPTEAEMAEADRNQEQRKSKKRILPRGTSEYQAAWIVDEEIDEEDSDNGDSDDDGMVLDRGEDHYSNQDQDFEDDKETLYVQDMDNETHNDSEMMDDENLTREQYEDQIKKIKEAHAEDEEFPDEVETPIDQPARKRFAKYRGLKSFRTSSWDPNESLPQDYARIFAFDNVVRTQKLVLKQAQKMEEESREDCVPTGSYVRLHIKEVPIVAASKLSSIVSTKPVIAFGLLQHESKMSVLNFSLKKYDGYEDPIKTKEELMFHVGFRQFVARPVFSTDNFRSDKHKMERFLHPGRFSLASVYGPISFPSLPAVVLKISEGSDAPAVAALGSLKSIEPNKIILKKIILTGYPQRVSKMKASVRYMFHNPEDVRWFKPVEVWTKCGRRGRVKEPVGTHGAMKCIFNGVVQQHDVVCMNLYKRAYPKWPERMYPQLL |